{ "_id": "6a1edcb4b401979e7340fe1f", "Package": "DA", "Version": "1.2.0", "Date": "2021-07-11", "Title": "Discriminant Analysis for Evolutionary Inference", "Description": "Discriminant Analysis (DA) for evolutionary inference\n(Qin, X. et al, 2020, ),\nespecially for population genetic structure and community\nstructure inference. This package incorporates the commonly\nused linear and non-linear, local and global supervised\nlearning approaches (discriminant analysis), including Linear\nDiscriminant Analysis of Kernel Principal Components (LDAKPC),\nLocal (Fisher) Linear Discriminant Analysis (LFDA), Local\n(Fisher) Discriminant Analysis of Kernel Principal Components\n(LFDAKPC) and Kernel Local (Fisher) Discriminant Analysis\n(KLFDA). These discriminant analyses can be used to do\necological and evolutionary inference, including demography\ninference, species identification, and population/community\nstructure inference.", "Authors@R": "c(person(\"Xinghu\", \"Qin\", role=c(\"aut\", \"cre\", \"cph\"),\nemail=\"qinxinghu@gmail.com\", comment=c(ORCID=\"0000-0003-2351-3610\")))", "biocViews": "BiomedicalInformatics, ChIPSeq, Clustering, Coverage,\nDNAMethylation, DifferentialExpression,\nDifferentialMethylation,Software, DifferentialSplicing,\nEpigenetics, FunctionalGenomics, GeneExpression,\nGeneSetEnrichment, Genetics, ImmunoOncology,\nMultipleComparison, Normalization, Pathways, QualityControl,\nRNASeq, Regression, SAGE, Sequencing, Software, SystemsBiology,\nTimeCourse, Transcription, Transcriptomics", "License": "GPL-3", "SystemRequirements": "GNU make", "URL": "https://xinghuq.github.io/DA/index.html", "BugReports": "https://github.com/xinghuq/DA/issues", "VignetteBuilder": "knitr", "NeedsCompilation": "no", "RoxygenNote": "6.1.1", "Config/pak/sysreqs": "cmake libglpk-dev make libicu-dev libuv1-dev\nlibxml2-dev libssl-dev libx11-dev zlib1g-dev", "Repository": "https://xinghuq.r-universe.dev", "Date/Publication": "2021-07-11 04:34:22 UTC", "RemoteUrl": "https://github.com/xinghuq/da", "RemoteRef": "HEAD", "RemoteSha": "ac25c45c193d32d8d8475a6ad580922915887118", "Packaged": { "Date": "2026-05-20 08:32:15 UTC", "User": "root" }, "Author": "Xinghu Qin [aut, cre, cph] (ORCID:\n)", "Maintainer": "Xinghu Qin ", "MD5sum": "5ba81e8afeff9a7974f9d38d40c08518", "_user": "xinghuq", "_type": "src", "_file": "DA_1.2.0.tar.gz", "_fileid": "57691fafec195af1d55d2cbc27cd1ada52a88b81ebe9c546fd613eaf72fbeea0", "_filesize": 1670424, "_sha256": "57691fafec195af1d55d2cbc27cd1ada52a88b81ebe9c546fd613eaf72fbeea0", "_created": "2026-05-20T08:32:15.000Z", "_published": "2026-06-02T13:37:56.257Z", "_distro": "noble", "_jobs": [ { "job": 79083421255, "time": 202, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "ERROR", "artifact": "7105133974" }, { "job": 79083421252, "time": 212, "config": "linux-release-x86_64", "r": "4.6.0", "check": "ERROR", "artifact": "7105137700" }, { "job": 79083421305, "time": 158, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "ERROR", "artifact": "7105118890" }, { "job": 79083421117, "time": 165, "config": "macos-release-arm64", "r": "4.6.0", "check": "ERROR", "artifact": "7105121192" }, { "job": 79083420675, "time": 243, "config": "source", "r": "4.6.0", "check": "OK", "artifact": "7105064318" }, { "job": 79083420277, "time": 139, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "7359246678" }, { "job": 79083421046, "time": 147, "config": "windows-devel", "r": "4.7.0", "check": "ERROR", "artifact": "7105115182" }, { "job": 79083421324, "time": 154, "config": "windows-oldrel", "r": "4.5.3", "check": "ERROR", "artifact": "7105118012" }, { "job": 79083421531, "time": 151, "config": "windows-release", "r": "4.6.0", "check": "ERROR", "artifact": "7105117074" } ], "_buildurl": "https://github.com/r-universe/xinghuq/actions/runs/26150836048", "_status": "success", "_host": "GitHub-Actions", "_upstream": "https://github.com/xinghuq/da", "_commit": { "id": "ac25c45c193d32d8d8475a6ad580922915887118", "author": "xinghuq <30358028+xinghuq@users.noreply.github.com>", "committer": "GitHub ", "message": "Add files via upload", "time": 1625978062 }, "_maintainer": { "name": "Xinghu Qin", "email": "qinxinghu@gmail.com", "login": "xinghuq", "twitter": "@XinghuQ", "description": "Dr Xinghu Qin. 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